A modular tool to aggregate results from bioinformatics analyses across many samples into a single report.
Report
generated on 2024-04-11, 13:10 EDT
based on data in:
/work/gmgi/Fisheries/epiage/haddock/methylation/deduplicated
General Statistics
Showing 68/68 rows and 1/2 columns.
| Sample Name | % Dups |
|---|---|
| Mae-263_S1_R1_001_val_1 | 30.6% |
| Mae-266_S2_R1_001_val_1 | 27.5% |
| Mae-274_S3_R1_001_val_1 | 36.0% |
| Mae-278_S4_R1_001_val_1 | 31.9% |
| Mae-281_S5_R1_001_val_1 | 34.9% |
| Mae-285_S6_R1_001_val_1 | 35.7% |
| Mae-293_S7_R1_001_val_1 | 34.2% |
| Mae-294_S8_R1_001_val_1 | 41.0% |
| Mae-295_S9_R1_001_val_1 | 33.7% |
| Mae-298_S10_R1_001_val_1 | 32.0% |
| Mae-302_S11_R1_001_val_1 | 40.2% |
| Mae-305_S12_R1_001_val_1 | 36.0% |
| Mae-310_S13_R1_001_val_1 | 31.2% |
| Mae-311_S14_R1_001_val_1 | 33.6% |
| Mae-317_S15_R1_001_val_1 | 36.4% |
| Mae-322_S16_R1_001_val_1 | 27.7% |
| Mae-327_S17_R1_001_val_1 | 35.3% |
| Mae-329_S18_R1_001_val_1 | 34.2% |
| Mae-330_S19_R1_001_val_1 | 31.8% |
| Mae-338_S20_R1_001_val_1 | 31.9% |
| Mae-342_S21_R1_001_val_1 | 40.3% |
| Mae-343_S22_R1_001_val_1 | 27.9% |
| Mae-344_S23_R1_001_val_1 | 32.1% |
| Mae-350_S24_R1_001_val_1 | 32.2% |
| Mae-352_S25_R1_001_val_1 | 27.9% |
| Mae-356_S26_R1_001_val_1 | 27.4% |
| Mae-368_S27_R1_001_val_1 | 29.1% |
| Mae-371_S28_R1_001_val_1 | 28.6% |
| Mae-378_S29_R1_001_val_1 | 33.5% |
| Mae-390_S32_R1_001_val_1 | 34.7% |
| Mae-396_S33_R1_001_val_1 | 27.9% |
| Mae-399_S34_R1_001_val_1 | 25.9% |
| Mae-403_S35_R1_001_val_1 | 30.2% |
| Mae-405_S36_R1_001_val_1 | 23.2% |
| Mae-410_S37_R1_001_val_1 | 29.4% |
| Mae-414_S38_R1_001_val_1 | 27.2% |
| Mae-421_S39_R1_001_val_1 | 27.1% |
| Mae-422_S40_R1_001_val_1 | 27.1% |
| Mae-424_S41_R1_001_val_1 | 25.8% |
| Mae-428_S42_R1_001_val_1 | 30.9% |
| Mae-432_S43_R1_001_val_1 | 27.1% |
| Mae-436_S44_R1_001_val_1 | 24.0% |
| Mae-440_S45_R1_001_val_1 | 29.4% |
| Mae-441_S46_R1_001_val_1 | 25.2% |
| Mae-449_S48_R1_001_val_1 | 27.9% |
| Mae-454_S49_R1_001_val_1 | 25.9% |
| Mae-464_S50_R1_001_val_1 | 40.6% |
| Mae-468_S51_R1_001_val_1 | 33.7% |
| Mae-470_S52_R1_001_val_1 | 34.9% |
| Mae-474_S57_R1_001_val_1 | 28.4% |
| Mae-475_S53_R1_001_val_1 | 27.6% |
| Mae-477_S54_R1_001_val_1 | 30.5% |
| Mae-481_S55_R1_001_val_1 | 29.4% |
| Mae-488_S56_R1_001_val_1 | 25.9% |
| Mae-495_S47_R1_001_val_1 | 41.2% |
| Mae-496_S58_R1_001_val_1 | 38.1% |
| Mae-499_S59_R1_001_val_1 | 32.7% |
| Mae-501_S60_R1_001_val_1 | 32.1% |
| Mae-502_S61_R1_001_val_1 | 30.9% |
| Mae-509_S62_R1_001_val_1 | 31.3% |
| Mae-512_S63_R1_001_val_1 | 31.8% |
| Mae-519_S64_R1_001_val_1 | 29.2% |
| Mae-520_S65_R1_001_val_1 | 31.2% |
| Mae-524_S66_R1_001_val_1 | 36.0% |
| Mae-525_S67_R1_001_val_1 | 28.6% |
| Mae-533_S68_R1_001_val_1 | 30.7% |
| Mae-535_S69_R1_001_val_1 | 29.9% |
| Mae-537_S70_R1_001_val_1 | 27.6% |
Bismark
Bismark is a tool to map bisulfite converted sequence reads and determine cytosine methylation states.DOI: 10.1093/bioinformatics/btr167.
